parsing_scripts.file_assignment package

Submodules

parsing_scripts.file_assignment.assign_all module

parsing_scripts.file_assignment.assign_all.assign(input_files, entity, entity_type, parameters)

Assign the selected input files (or all the files if checked) to every selected ENTITY

For each ENTITY (experiment, platforms or samples) for which a parsing script is selected, all the (selected) input files will be assigned regardless.

PARAMETERS:
None

parsing_scripts.file_assignment.match_entity_name module

parsing_scripts.file_assignment.match_entity_name.assign(input_files, entity, entity_type, parameters)

Assign the selected input files (or all the files if checked) to every ENTITY with matching NAME

For each ENTITY (experiment, platforms or samples) for which a parsing script is selected, only the (selected) input files with a name that match the one of the entity will be assinged (for example a file name GSE123.soft would match the experiment entity GSE123).

PARAMETERS:
None

Module contents